diff --git a/Changelog.md b/Changelog.md
index e53b4ebf3..b8e9235b9 100644
--- a/Changelog.md
+++ b/Changelog.md
@@ -24,6 +24,8 @@
 <details>
 <summary><strong> 🐞 修复问题 </strong></summary>
 
+- 修复应用退出时无条件重写 `clash.yaml`、`verge.yaml` 和 `profiles.yaml` 导致文件创建时间丢失的问题
+
 - 修复检测更新后又发布新版时，应用内更新失败
 - 修复订阅响应过大导致内存占用过高，限制单次下载为 4 MiB
 - 修复全局模式默认停在 `DIRECT` 或 `REJECT` 导致流量未经代理，现自动切换到第一个策略组
diff --git a/crates/clash-verge-draft/src/lib.rs b/crates/clash-verge-draft/src/lib.rs
index c9bf560e5..0dcf1c5a6 100644
--- a/crates/clash-verge-draft/src/lib.rs
+++ b/crates/clash-verge-draft/src/lib.rs
@@ -74,12 +74,16 @@ impl<T: Clone> Draft<T> {
         result
     }
 
-    /// Commits and clears the draft.
+    /// Commits and clears the draft, reporting whether one was staged.
     #[inline]
-    pub fn apply(&self) {
+    pub fn apply(&self) -> bool {
         let mut guard = self.inner.data.lock();
-        if let Some(d) = guard.1.take() {
-            guard.0 = d;
+        match guard.1.take() {
+            Some(d) => {
+                guard.0 = d;
+                true
+            }
+            None => false,
         }
     }
 
diff --git a/src-tauri/src/config/config.rs b/src-tauri/src/config/config.rs
index 59e6f921d..a0cb4191d 100644
--- a/src-tauri/src/config/config.rs
+++ b/src-tauri/src/config/config.rs
@@ -280,25 +280,29 @@ impl Config {
     }
 
     /// Commits drafts during exit/restart/shutdown so user changes are not lost.
+    /// A config with nothing staged keeps its file, so its timestamps stay put.
     pub async fn apply_all_and_save_file() {
         logging!(debug, Type::Config, "save all draft data");
         let save_clash_task = AsyncHandler::spawn(|| async {
             let clash = Self::clash().await;
-            clash.apply();
-            logging_error!(Type::Config, clash.data_arc().save_config().await);
+            if clash.apply() {
+                logging_error!(Type::Config, clash.data_arc().save_config().await);
+            }
         });
 
         let save_verge_task = AsyncHandler::spawn(|| async {
             let verge = Self::verge().await;
-            verge.apply();
-            logging_error!(Type::Config, verge.data_arc().save_file().await);
+            if verge.apply() {
+                logging_error!(Type::Config, verge.data_arc().save_file().await);
+            }
         });
 
         let save_profiles_task = AsyncHandler::spawn(|| async {
             let _profile_write = super::profiles::PROFILE_WRITE_LOCK.lock().await;
             let profiles = Self::profiles().await;
-            profiles.apply();
-            logging_error!(Type::Config, profiles.data_arc().save_file().await);
+            if profiles.apply() {
+                logging_error!(Type::Config, profiles.data_arc().save_file().await);
+            }
         });
 
         let _ = tokio::join!(save_clash_task, save_verge_task, save_profiles_task);